All assignments are due on Gradescope at 11:59pm Eastern Time.

LaTeX Template

The LaTeX template can be found here.

Homeworks

Homework	Out	In	Support Files
Course Setup Form	1/25/24	2/6/24
Homework 1: BLAST and Karlin-Altschul Statistics	1/30/24	2/8/24
Homework 2: Graph and Sequence Inference	2/15/24	2/22/24	LaTeX Template
Homework 3: Ancestral Recombination Graphs	4/4/24	4/11/24	LaTeX Template
Homework 4: Baum-Welch Algorithm	4/16/24	4/23/24

Projects

Project	Out	In	Support Files
Project 1: BLAST	2/1/24	2/15/24
Project 2: Contamination and Correction	2/15/24	2/29/24
Project 3: Genome Assembly	3/14/24	4/4/24
Project 4: Clustering	4/24/24	5/8/24
Final Project: Protein Folding	5/10/24	5/17/24

Exams

Exam	Out	In	Support Files
Midterm	3/12/24	-

Final Project (those seeking 2820 credit only!)

Checkpoints	Dates
Project Proposal Meetings	Week of April 14
Project Presentations	At the Discretion of Prof. Istrail and HTA
Project Powerpoint, Paper, and Code	At the Discretion of Prof. Istrail and HTA