Dissertation

  

Design and analysis of optimal decoding models for brain-machine interfaces

Ph.D. Dissertation, ECE Dpet. University of Florida, May 2005 (pdf)

 

 

Publications

 

Multi-state decoding of point-and-click control signals from motor cortical activity in a human with tetraplegia (pdf)

S-.P. Kim, J.D. Simeral, L.R. Hochberg, J.P. Donoghue, G.M. Friehs and M.J. Black

Proc. of the 3rd IEEE EMBS Conf. on Neural Engineering, pp. 486-489, 2007

 

Real time quantification of neural ensemble correlation with behavioral tasks

S-.P. Kim, J.C. Sanchez, J.M. Carmena, M.A.L. Nicolelis and J.C. Principe

Submitted to IEEE Trans. on Neural Sys. and Rehabil. Eng., 2007

   

Nonlinear physically-based models for decoding motor-cortical population activity (pdf)

G. Shakhnarovich, S-.P. Kim and M.J. Black

Advances in Neural Information Processing Systems 2006, 19, pp. 1257-1264, 2007

 

Finding directional movement representations in motor cortical neural populations using nonlinear manifold learning (abstract)

S-.P. Kim, J.D.Simeral, O.C.Jenkins, J.P. Donoghue, and M.J. Black

Presented at the World Congress on Medical Physics and Biomedical Engineering 2006, Seoul, Korea, August 27-September 1, 2006  

 

Statistical analysis of the non-stationarity of neural population codes (pdf)

S-.P. Kim, F. Wood, M. Fellows, J.P. Donoghue, and M.J. Black

Presented at the 1st IEEE / RAS-EMBS Int'l Conf on Biomedical Robotics and Biomechatronics, Pisa, Tuscany, Italy, February 20-22, 2006  

 

Independently coupled HMM switching classifier for a bimodal brain-machine interface

S. Darmanjian, S-.P. Kim, M.C. Nechyba, J.C. Principe, J. Wessberg and M.A.L. Nicolelis

Proc. of the IEEE Int’l Workshop on Machine Learning for Signal Processing, pp. 379-384, Sept. 2006

 

A comparison of optimal MIMO linear and nonlinear models for brain-machine interfaces (pdf)

S-.P. Kim, J.C. Sanchez, Y.N. Rao, D. Ergodmus, J.C. Principe, J.M. Carmena, M.A. Lebedev, and M.A.L. Nicolelis

Journal of Neural Engineering, 3, pp. 145-161, 2006

  

Real time input selection for linear time-variant MIMO systems (pdf)

S-.P. Kim, J.C. Sanchez and J.C. Principe

Optimization Methods and Software, 22, pp. 83-89, 2007

 

Dynamic learning of a self-organizing map for spike reconstruction (pdf)

J. Cho, A.R.C. Paiva, S-.P. Kim, J.C. Sanchez and J.C. Principe

Neural Networks, 20, pp. 274-284, 2007

 

Determining patterns in neural activity for reaching movements using non-negative matrix factorization (pdf)

S-.P. Kim, Y.N. Rao, D. Ergodmus, J.C. Sanchez, M.A.L. Nicolelis, and J.C. Principe

Special Issue of Trends in Brain Computer Interfaces, EURASIP Journal of Applied Sig. Proc., 2005(19), pp. 3113-3121, 2005

 

Divide-and-conquer approach for brain-machine interfaces: Nonliner mixture of competitive linear models (pdf)

S-.P. Kim, J.C. Sanchez, D. Ergodmus, Y.N. Rao, J.C. Principe, and M.A.L. Nicolelis

Neural Networks, Vol. 16, No. 5-6, pp. 865-871, 2003

 

Multiresolution analysis and data mining of neural spikes for brain-machine interfaces (pdf)

S-.P. Kim, J.M. Carmena, M.A.L. Nicolelis, and J.C. Principe

The 2nd International IEEE EBMS Conference on Neural Engineering, Arlington, VA, USA, March 16-19, 2005

 

Learning mappings in brain-machine interfaces with echo state networks (pdf)

Y.N. Rao, S-.P. Kim, J.C. Sanchez, D. Erdogmus, J.C. Principe, J.C. Carmena, M.A. Lebedev, and M.A.L. Nicolelis

IEEE International Conference on Acoustic, Speech, and Sig. Proc., Philadelphia, PA, USA, March 18-23, 2005

 

Separating spatial and temporal activation patterns in fMRI using competitive subspace projection (pdf)

R. Yan, G. He, D. Erdogmus, S-.P. Kim, J.C. Principe and Y. Lui

IEEE International Conference on Acoustic, Speech, and Sig. Proc., Philadelphia, PA, USA, March 18-23, 2005

 

Sparse channel estimation with regularization method using convolutional inequality for entropy (pdf)

D. Han, S-.P. Kim, and J.C. Principe

IEEE International Joint Conference on Neural Networks, Quebec, Canada, July 31- Aug 4, 2005

 

Comparison of TDNN Training Algorithms in Brain Machine Interfaces (pdf)

Y. Wang, S-.P. Kim and J.C. Principe

IEEE International Joint Conference on Neural Networks, Quebec, Canada, July 31- Aug 4, 2005

 

Tracking multivariate time-variant systems based on on-line variable selection (pdf)

S-.P. Kim, Y.N. Rao, D. Erdogmus, and J.C. Principe

Proceedings of Machine Learning for Signal Processing, pp. 123-132, Sao Luis, Brazil, Sep 29 - Oct 1, 2004

 

Interpreting neural activity through linear and nonlinear models for brain machine interface (pdf)

J.C. Sanchez, D. Erdogmus, Y.N. Rao, S-.P. Kim, M.A.L. Nicolelis, J. Wessberg, and J.C. Principe

Proceedings of EMBS, pp. 2160-2163, Cancun, Mexico, Sept. 2003

 

A hybrid subspace projection method for system identification (pdf)

S-.P. Kim, Y.N. Rao, D. Erdogmus, and J.C. Principe

IEEE International Conference on Acoustic, Speech, and Sig. Proc., pp. VI312-VI314, Hong Kong, April 6-10, 2003

 

Bimodal brain-machine interfaces for motor control of robotic prosthetic (pdf)

S. Darmanjian, S-.P. Kim, M. Nechyba, S. Morrison, and J.C. Principe

presented in IEEE/RSJ International Conference on Intelligent Robots and Systems, Las Vegas, NV, USA, 2003

 

Modeling relation from motor control neuronal firing to hand movements using competitive linear filters and a MLP (pdf)

S-.P. Kim, J.C. Sanchez, D. Ergodmus, Y.N. Rao, J.C. Principe, and M.A.L. Nicolelis

Proceedings of International Joint Conference on Neural Networks, pp. 332-336, Portland, OR, USA, July, 2003

 

Input-output mapping performance of linear and nonlinear models for estimating hand positions from cortical neuronal firing patterns (pdf)

J.C. Sanchez, S-.P. Kim, D. Ergodmus, Y.N. Rao, J.C. Principe, J. Wessberg, and M.A.L. Nicolelis

Proceedings of IEEE International Workshop on Neural Networks for Sig. Proc., pp. 139-148, Valais, Switzerland, Sept. 2002

 

A recursive Renyis entropy estimator (pdf)

D. Erdogmus, J.C. Principe, S-.P. Kim, and J.C. Sanchez

Proceedings of IEEE International Workshop on Neural Networks for Sig. Proc., pp. 209-217, Valais, Switzerland, Sept. 2002

 

 

Presentations

 

Cortical cursor control by humans with tetraplegia using a direct intracortical neural interface systems

Workshop on Innovation in Computation Approaches for Brain Machine Interfaces, IEEE IJCNN'07, Aug. 17, 2007, Orlando, FL 

  

Real time neuronal subset selection in BMIs

Conference on Systems Analysis, Data Mining and Optimization in Biomedicine, Feb. 2-4 2005, University of Florida, Gainesville, FL 

 

 

Posters

 

Point-and-click cursor control by a person with tetraplegia using an intracortical neural interface systems

Neuroscience 2007, Society for Neuroscience, Nov. 2-7, 2007, San Diego, CA 

  

A comparison of decoding models for imagined motions from human motor cortex (pdf)

Neuroscience 2006, Society for Neuroscience, Oct. 14-18, 2006, Atlanta, GA